DNA Fingerprinting

Marker and primer development for robust polymorphism detection across plant, animal, and human genomes.

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What we do

Primer development for polymorphism

  • Primers for multi-locus genes and gene families
  • Assays for distinguishing individuals and populations
  • Design strategies compatible with PCR/qPCR and downstream genotyping

Repeat-based amplification polymorphism

  • Simple repeats (SSR) and tandem repeat markers
  • Retrotransposon-based markers (IRAP/REMAP-like strategies)
  • Custom repeat-driven marker schemes for specific genomes

In silico and lab-ready outputs

  • In silico validation and off-target screening (where reference data is available)
  • Deliverables optimized for ordering and lab execution
  • Guidance for electrophoresis/fragment analysis readouts

Diagnostics alignment (optional)

If the fingerprinting task is part of a diagnostic workflow (identity, contamination control, lineage tracking), we can align design constraints to diagnostic requirements.

Typical deliverables

  • Primer list (CSV/Excel) with target annotations and recommended conditions
  • Marker type description (SSR / repeat-based / gene-family)
  • Recommended readout: gel electrophoresis, capillary, or sequencing-based options
  • Optional: short protocol notes for standardization across batches
Fingerprint example
Example visualization for repeat-based amplification polymorphism.

Start a fingerprinting project

Send organism information, goal (individual ID / population / trait-linked markers), expected number of samples, and preferred readout method.