PrimerDigital

Find Window – use F3, is the quick way to find exact word in general editor.

Menu toolbar

•  Clean text at current open TAB editor (Ctrl-D)
•  Open file into general editor
•  Open file into memory, sequence will not appear in TAB editor
•  Save text as Rich Text (.RTF) or Excel (.XLS) formats from opened TAB.

•  For starting any job, need press F5 or from tool bar press
  

Quick sequence transformation

Tool for converting sequences to IUB/IUPAC FASTA format (Ctrl-F1);
Tool bar for converting the sequences to FASTA format with saving original sequence (alignment) (Ctrl-F2);


FastPCR program includes tools for the manipulation of DNA or protein sequences:  

•  Reverse (e.g. acacacc become ccacaca) (Ctrl-F3)
•  Complement (e.g. acacacc become tgtgtgg) (Ctrl-F4)
•  Reverse-Complement transformation (e.g. acacacc become ggtgtgt) (Ctrl-F5)
•  DNA-to-protein translation in all the 6 reading frames; orientation, complementation of protein sequence, and protein-to-DNA translation (Ctrl-F6)
•  Tool for joining all sequences into a single sequence (Ctrl-F7)
•  Export data from opened Tab into Excel sheet (Ctrl-F8) 
•  Names to Number List (Ctrl-F9) – tool for converting sequences to FASTA format with changing sequence’s name to number. Default is 1, to specify initial number, type in additional editor this number
• Tab-Table Format (Ctrl-F11) – tool for converting sequences to column format with Tab separator between names
• Blank-Table Format (Ctrl-F12) – tool for converting sequences to column format with space separator between names

•  Selecting and extracting fragments tool for linear sequence. Using additional editor, you can specify region(s) for extracting from sequence(s). To select fragments needs to select a beginning and an end that will be the beginning and end of the produced fragment.
  

Example, type on sequence description:
> 1 100 300 550
acgacgcagcagcacgacagt...

Output result extraction: the sub-fragments between 1 and 100 and second between 300 and 550.